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Table 1 Primers for real time PCR, amplicon size, values of slope, PCR efficiency and linearity (R2).

From: Searching for molecular markers in head and neck squamous cell carcinomas (HNSCC) by statistical and bioinformatic analysis of larynx-derived SAGE libraries

Genes

Primers

5' → 3'

Amplicon size (bp)

Slope

PCR Efficiency

R2

GNA15

Forward

GAGAACCGCATGAAGGAGAG

84

-3.312

100.0

0.991

 

Reverse

AAAGAGGATGACGGATGTGC

    

KRT31

Forward

TGAGCAGGAGGTCAATACCC

110

-2.913

120.4

0.990

 

Reverse

GACTCCTGGTCTCGTTCAGC

    

BST2

Forward

GGAGGAGCTTGAGGGAGAG

75

-3.476

93.9

0.991

 

Reverse

CTCAGTCGCTCCACCTCTG

    

MFAP2

Forward

GCCGTGAGGAACAGTACCC

91

-3.152

107.6

0.990

 

Reverse

CGGAGGCTGTAGAAGCAGAC

    

TUBA6

Forward

TCAACACCTTCTTCAGTGAAACG

101

-3.341

99.2

0.991

 

Reverse

AGTGCCAGTGCGAACTTCATC

    

GAPDH

Forward

ACCCACTCCTCCACCTTTGA

101

-3.392

97.1

0.990

 

Reverse

CTGTTGCTGTAGCCAAATTCGT

    

ACTB

Forward

GGCACCCAGCACAATGAAG

66

-3.255

102.8

0.994

 

Reverse

CCGATCCACACGGAGTACTTG

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