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Table 2 Real Time PCR Analysis of Selected Genes in Subcutaneous and Omental LAT and HAT Groups

From: Association of adipocyte genes with ASP expression: a microarray analysis of subcutaneous and omental adipose tissue in morbidly obese subjects

Gene

Accession #

Subcutaneous

Omental

  

LAT

HAT

%

LAT

HAT

%

C5L2

NM_018485

0.950 ± 0.105

1.958 ± 0.237**

206% (NA)

1.161 ± 0.096

2.684 ± 0.263**

231% (NA)

C3

NM_000064

0.588 ± 0.086

0.928 ± 0.117*

158% (134%)

2.655 ± 0.829

2.344 ± 0.026

88% (45%)

C5aR

NM_00173

1.412 ± 0.189

1.588 ± 0.120

112% (78%)

1.738 ± 0.240

1.926 ± 0.229

111% (122%)

CD36

NM_000072

0.877 ± 0.134

1.717 ± 0.212**

196% (268%)

0.411 ± 0.072

0.874 ± 0.103**

213% (96%)

DGAT2

NM_032564

1.671 ± 0.358

3.383 ± 0.513*

202% (245%)

0.606 ± 0.207

1.110 ± 0.151*

183% (144%)

FABP4

NM_001442

0.732 ± 0.093

0.776 ± 0.075

106% (128%)

0.638 ± 0.064

0.739 ± 0.083

116% (92%)

CEBPγ

NM_001806

1.006 ± 0.226

1.497 ± 0.126*

160% (143%)

3.371 ± 1.694

3.607 ± 1.318

97% (75%)

INSR

X02160

1.553 ± 0.278

1.580 ± 0.252

102% (112%)

1.407 ± 0.617

1.630 ± 0.371

116% (62%)

  1. Gene expression in SC and OM adipose tissue from Lower ASP and TG (LAT) and Higher ASP and TG (HAT) subjects as assessed by ΔΔ real time RT-PCR relative to the housekeeping gene B2M. Data are means ± SEM (n = 8 to 16 total per group) and are analysed by t test, where * p < 0.05, and ** p < 0.01. Percentage change of HAT vs LAT is provided, with the comparative value from microarray analysis (see Figures and Additional File 1, Table S1 for data) given in parentheses, where NA = not available.