ID | sample specification | Target size | # uniquely aligned reads | % reads on target | # of enriched regions | # of SNVs called (20×) |
---|---|---|---|---|---|---|
Pat1_B | Snap-frozen | 52 Mb | 66, 114, 467 | 75.4% | 200, 175 | 18, 287 |
Pat1_B | FFPE | 52 Mb | 71, 590, 872 | 74.7% | 200, 032 | 17, 810 |
Pat11_B | Snap-frozen | 3.9 Mb | 28, 043, 981 | 62.8% | 12, 274 | 3, 000 |
Pat11_T | Snap-frozen | 3.9 Mb | 18, 302, 565 | 71.3% | 12, 226 | 2, 511 |
Pat11_B | FFPE | 3.9 Mb | 9, 311, 629 | 67.1% | 12, 175 | 2, 577 |
Pat11_T | FFPE | 3.9 Mb | 15, 928, 525 | 73.7% | 12, 254 | 2, 883 |
Pat2_T | 500 ng | 3.9 Mb | 8, 760, 773 | 81.1% | 12, 220 | 2, 652 |
Pat2_T | 1500 ng | 3.9 Mb | 9, 686, 320 | 79.9% | 12, 243 | 2, 848 |
Pat2_T | 3000 ng | 3.9 Mb | 6, 810, 410 | 80.4% | 12, 204 | 2, 602 |
Pat3_B | Benign tissue | 3.9 Mb | 19, 617, 926 | 67.7% | 12, 122 | 2, 002 |
Pat3_T | Focus-1 | 3.9 Mb | 28, 798, 280 | 68.9% | 12, 227 | 2, 328 |
Pat3_T | Focus-2 | 3.9 Mb | 31, 939, 154 | 69.6% | 11, 142 | 2, 513 |
Pat4_B | Benign tissue | 3.9 Mb | 8, 878, 742 | 66.2% | 12, 281 | 2, 662 |
Pat4_T | Focus-1 | 3.9 Mb | 8, 768, 332 | 64.2% | 12, 288 | 2, 645 |
Pat4_T | Focus-2 | 3.9 Mb | 9, 178, 790 | 65.3% | 12, 269 | 2, 706 |
Pat5_B | Benign tissue | 3.9 Mb | 25, 957, 461 | 63.2% | 12, 274 | 2, 646 |
Pat5_T | Focus-1 | 3.9 Mb | 65, 372, 578 | 64.4% | 12, 261 | 2, 388 |
Pat5_T | Focus-2 | 3.9 Mb | 25, 957, 461 | 63.0% | 11, 157 | 2, 342 |