Table 3 Results for the 8 genes included in the classifier and chosen for qPCR validation on FFPE samples
Gene | Signal log ratio (FTC vs. FTA) | Non-corrected p-value | Bonferroni-corrected p-value | ||
|---|---|---|---|---|---|
| Â | Dataset A | Training dataset B | Validation dataset C (FFPE) | Validation dataset C (FFPE) | Validation dataset C (FFPE) |
ELMO1 | -2.15 | -2.36 | -0.98 | 0.0075 | 0.0377 |
EMCN | -1.94 | -2.25 | -1.17 | 0.0003 | 0.0015 |
ITIH5 | -1.51 | -1.98 | -0.38 | 0.0443 | 0.2214 |
KCNAB1 | -2.45 | -3.35 | -1.67 | 0.0020 | 0.0100 |
SLCO2A1 | -1.86 | -1.45 | -1.23 | 0.0003 | 0.0014 |
LRP1B | -2.15 | -2.7 | Insufficient amplification | ||
CA4 | -2.77 | -2.92 | Insufficient amplification | ||
PLEKHG4B | -1.88 | -1.36 | Insufficient amplification | ||