Molecular profiling of thyroid cancer subtypes using large-scale text mining

BMC Medical Genomics

Table 1 TC subtype classification performance on the SC_GOLD corpus.

		TP	TN	FN	FP	Precision	Recall	F1
Our Method	PTC	641	372	186	14	0.979	0.775	0.865
	ATC	114	1066	27	6	0.950	0.809	0.874
	FTC	21	1081	12	99	0.175	0.636	0.275
	FTC*	75	1081	12	45	0.625	0.862	0.725
	MTC	189	979	41	4	0.979	0.822	0.894
	Micro Average	1019	3498	266	69	0.937	0.793	0.859
		TP	TN	FN	FP	Precision	Recall	F1
Baseline	PTC	601	372	226	14	0.977	0.727	0.834
	ATC	109	1063	32	9	0.924	0.773	0.842
	FTC	19	1061	14	119	0.320	0.485	0.386
	FTC*	73	1061	14	65	0.529	0.839	0.649
	MTC	181	971	49	12	0.938	0.787	0.856
	Micro Average	964	3467	321	100	0.906	0.750	0.821

FTC* is the result after adjusting the results by considering WDTC. The micro-average calculation uses FTC*.

ISSN: 1755-8794