Table 2 KEGG pathway and DAVID functional analysis results for PPIA + ellipsoidFN method and DEG + ellipsoidFN method on data set GSE10797 for two class case.
From: Identifying network biomarkers based on protein-protein interactions and expression data
| Â | PPIA + ellipsoidFN | DEG + ellipsoidFN |
|---|---|---|
KEGG pathways | Renal cell carcinoma Neurotrophin signaling pathway Focal adhesion Aldosterone-regulated sodium reabsorption Pathways in cancer | Focal adhesion Pathways in cancer Small cell lung cancer ECM-receptor interaction Ribosome |
DAVID functional analysis | GOTERM_MF_FAT transcription factor binding GOTERM_MF_FAT transcription cofactor activity RT GOTERM_MF_FAT SMAD binding GOTERM_BP_FAT positive regulation of macromolecule metabolic process | GOTERM_BP_FAT peptide cross-linking GOTERM_CC_FAT cytosol SP_PIR_KEYWORDS phosphoprotein UP_SEQ_FEATURE cross-link:Isoglutamyl lysine isopeptide (Gln-Lys) GOTERM_MF_FAT structural molecule activity |