Table 1 Spearman correlations for the 18-gene RAS signature scores among six datasets, including Affy_FF, NanoS_FFPE, RNA-Acc_FFPE, t-RNA_FFPE, and rRNA_ FFPE on 54 and 39 samples
From: Adaptation of a RAS pathway activation signature from FF to FFPE tissues in colorectal cancer
Mean Score | Affy FF | Affy FFPE | NanoS FFPE | RNA-Acc FFPE | t-RNA FFPE | rRNA FFPE |
|---|---|---|---|---|---|---|
A. 54 samples | ||||||
Affy FF | 1 | 0.233 (0.090) | 0.608 (<0.0001) | 0.175 (0.207) | −0.237 (0.085) | −0.012 (0.934) |
Affy FFPE | 1 | 0.399 (0.003) | 0.760 (<0.0001) | 0.278 (0.042) | 0.260 (0.058) | |
NanoS FFPE | 1 | 0.473 (0.0003) | −0.207 (0.134) | 0.033 (0.814) | ||
RNA-Acc FFPE | 1 | 0.262 (0.056) | 0.225 (0.102) | |||
t-RNA FFPE | 1 | 0.142 (0.306) | ||||
rRNA FFPE | 1 | |||||
B. 39 samples | ||||||
Affy FF | 1 | 0.556 (0.0002) | 0.631 (<0.0001) | 0.261 (0.109) | −0.287 (0.076) | 0.123 (0.455) |
Affy FFPE | 1 | 0.832 (<0.0001) | 0.778 (<0.0001) | 0.006 (0.973) | 0.091 (0.581) | |
NanoS FFPE | 1 | 0.733 (<0.0001) | −0.177 (0.282) | 0.099 (0.551) | ||
RNA-Acc FFPE | 1 | 0.043 (0.797) | 0.090 (0.587) | |||
t-RNA FFPE | 1 | −0.071 (0.668) | ||||
rRNA FFPE | 1 | |||||