Table 2 Spearman correlations for the 16-gene RAS signature scores among six datasets, including Affy_FF, NanoS_FFPE, RNA-Acc_FFPE, rRNA_FFPE, and t-RNA_ FFPE on 54 and 39 samples
From: Adaptation of a RAS pathway activation signature from FF to FFPE tissues in colorectal cancer
Mean Score | AffyFF | Affy FFPE | NanoS FFPE | RNA-Acc FFPE | t-RNA FFPE | rRNA FFPE |
|---|---|---|---|---|---|---|
A. 54 samples | ||||||
Affy FF | 1 | 0.300 (0.028) | 0.707 (<0.0001) | 0.264 (0.054) | −0.195 (0.157) | 0.019 (0.890) |
Affy FFPE | 1 | 0.361 (0.007) | 0.773 (<0.0001) | 0.296 (0.030) | 0.369 (0.006) | |
NanoS FFPE | 1 | 0.487 (0.0002) | −0.155 (0.264) | 0.039 (0.779) | ||
RNA-Acc FFPE | 1 | 0.262 (0.056) | 0.295 (0.031) | |||
t-RNA FFPE | 1 | 0.194 (0.159) | ||||
rRNA FFPE | 1 | |||||
B. 39 samples | ||||||
Affy FF | 1 | 0.672 (<0.0001) | 0.738 (<0.0001) | 0.483 (0.002) | −0.228 (0.163) | 0.174 (0.290) |
Affy FFPE | 1 | 0.845 (<0.0001) | 0.754 (<0.0001) | 0.014 (0.934) | 0.170 (0.301) | |
NanoS FFPE | 1 | 0.802 (<0.0001) | −0.096 (0.560) | 0.150 (0.361) | ||
RNA-Acc FFPE | 1 | 0.053 (0.750) | 0.182 (0.269) | |||
t-RNA FFPE | 1 | −0.018 (0.915) | ||||
rRNA FFPE | 1 | |||||