Basal-like breast cancer: molecular profiles, clinical features and survival outcomes

BMC Medical Genomics

Table 1 The 80-probe signature related to survival (Continuation)

Gs	Gene	Probe ID	B	ND
	IL2RA	ILMN_1683774	0	1
	MARCH1	ILMN_2094942	0.05	3
	LAP3	ILMN_1683792	0	1
	GPR65	ILMN_2232121	0.03	2
	GPR65	ILMN_1734740	0.05	2
	FAM26F	ILMN_2066849	0	1
	CXCL11	ILMN_2067890	0	1
	NFS1	ILMN_1761314	0.05	2
	CXCR6	ILMN_1674640	0.68	10
	RASSF5	ILMN_2362902	0.07	2
	NAPSB	ILMN_1723043	0.05	3
	IKZF1	ILMN_1676575	0	1
	PTPN22	ILMN_1715885	0	1
	PTPRC	ILMN_1653652	0.07	3
	PTPN22	ILMN_2246328	0	1
G3	RPL36AL	ILMN_2189936	0	1
	GARNL3	ILMN_1779347	0	1
	PNPLA4	ILMN_1664348	0	1
	SH3BGRL	ILMN_1702835	0.03	2
	HS.576380	ILMN_1848030	0	1
	FMO1	ILMN_1684401	0	1
	CTSK	ILMN_1758895	0.1	4
	EGR2	ILMN_1743199	0	1
	CLEC1A	ILMN_1691339	0	1
	HSD11B1	ILMN_2389501	0.03	2
	CEBPA	ILMN_1715715	0	1
	TIMP3	ILMN_1701461	0.03	2
	FBXL5	ILMN_1673370	0	1
	SCARNA9	ILMN_1805064	0	1
	PPM1M	ILMN_1657810	0.05	3
	DOCK6	ILMN_1801226	0	1

The 80 annotated Illumina probes distinguishing between basal-like subgroups are listed in this table. The official gene symbol (Gene), from UCSC Genome Browser, and Illumina probe IDs (Probe ID) are provided for each probe group (Gs), in the same order as shown in Fig. 1. This table also contains the betweenness centrality (B) and node degree (ND) values calculated for each probe in the basal-like training set

ISSN: 1755-8794