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Table 2 Regions of homozygous deletions identified by SNP array in this series.

From: Genome wide SNP comparative analysis between EGFR and KRAS mutated NSCLC and characterization of two models of oncogenic cooperation in non-small cell lung carcinoma

CHR CYTOBAND Deletion START Deletion END No OF T WITHOUT EGFR MUT No OF T WITH EGFR MUT KNOWN GENES WITHIN REGIONS GENES   
2 2q36.3 227428860 228480608 0 2(1LOH+1HOMO) 3 RHBDD1 COL4A4 COL4A3
9 9p21.1 21701815 22685593 2 (LOH) 7(4LOH+3HOMO) 3 CDKN2A/2B MTAP DMRTA1
12 12q13.13 49778776 50467951 1(LOH) 1HOMO 3 TFCP2 POU6F1 DAZAP2
18 18q12.1 25534701 27580619 2(LOH) 3(2LOH+1HOMO) 3 CDH2 DSC3 DSG2
18 18q21.2 46939466 49883403 2(LOH) 4(3LOH+1HOMO) 2 RKHD2 DCC  
  1. Homozygous deletion were validated by real time quantitative PCR for CDKN2A, DCC, DSC3 and DSG2.
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