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Table 4 Statistical analysis: CCND1, CCNE1, CDKN2A associations with clinico-pathological features and other gene alterations.

From: Genome wide SNP comparative analysis between EGFR and KRAS mutated NSCLC and characterization of two models of oncogenic cooperation in non-small cell lung carcinoma

CDKN2A

CDKN2A presence of homozygous deletion n (%)

CDKN2A absence of homozygous deletion n (%)

p

Age

 

62

62,6

NS

Gender

Women

6 (12)

44 (88)

0,157

 

Men

2 (4)

46 (96)

 

Histology

ADC

7 (10)

61 (90)

0,483

 

LCC

0 (0)

6 (100)

 
 

SCC

1 (4)

23 (96)

 

Tobacco

Never-smoker

5 (20)

20 (80)

0,012

 

Smoker

3 (4)

70 (96)

 
 

Mutated

5 (33)

10 (67)

 

EGFR

Non-mutated

3 (4)

80 (96)

0,002

 

Mutated

1 (5)

19 (95)

 

KRAS

Non-mutated

7 (9)

71 (91)

0,563

 

Mutated

1 (14)

6 (86)

 

STK11

Non-mutated

7 (8)

84 (92)

0,46

 

Mutated

3 (7)

40 (93)

 

TP53

Non-mutated

5 (9)

50 (91)

0,704

AKT-mTOR activation*

Yes

7 (29)

17 (71)

<0,001

 

No

1 (1)

73 (99)

 

CCND1

Amplification n (%)

No amplification n (%)

P

Age

 

61,8

63

NS

Gender

Women

5 (10)

45 (90)

0,331

 

Men

8 (17)

40 (83)

 

Histology

ADC

6 (9)

62 (91)

0,079

 

LCC

2 (33)

4 (67)

 
 

SCC

5 (21)

19 (71)

 

Tobacco

Never-smoker

0

25 (100)

0,023

 

Smoker

13 (18)

60 (82)

 

EGFR

Mutated

1 (7)

14 (93)

0,331

 

Non-mutated

12 (14)

71 (86)

 

KRAS

Mutated

2 (10)

18 (90)

0,629

 

Non-mutated

11 (14)

67 (86)

 

STK11

Mutated

1 (1)

6 (99)

0,934

 

Non-mutated

12 (13)

79 (87)

 

TP53

Mutated

9 (21)

34 (79)

0,048

 

Non-mutated

4 (7)

51 (83)

 

AKT-mTOR activation*

Yes

2 (8)

22 (92)

0,412

 

No

11 (15)

63 (85)

 

CCNE1

Amplification n (%)

No-amplification n (%)

P

Age

 

67

62,5

NS

Gender

Women

2 (4)

47 (96)

0,371

 

Men

4 (8)

45 (92)

 

Histology

ADC

2 (3)

66 (97)

0,099

 

LCC

1 (1)

5 (99)

 
 

SCC

3 (13)

21 (87)

 

Tobacco

Never-smoker

1 (1)

24 (99)

0,518

 

Smoker

5 (17)

68 (83)

 

EGFR

Mutated

1 (1)

14 (99)

0,924

 

Non-mutated

5 (7)

78 (93)

 

KRAS

Mutated

1 (1)

19 (99)

0,814

 

Non-mutated

5 (6)

73 (94)

 

STK11

Mutated

0

7 (100)

0,483

 

Non-mutated

6 (7)

85 (93)

 

TP53

Mutated

6 (15)

37 (85)

0,006

 

Non-mutated

0

55 (100)

 

AKT-mTOR activation*

Yes

2 (8)

22 (82)

0,603

 

No

4 (5)

70 (85)

 
  1. In this work we called PI3K-AKT-mTOR activated tumors, tumors with either EGFR, PIK3CA, ERBB2 or STK11 mutation*.