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Table 1 Name and function of the differentially expressed genes that best distinguish samples by cell type variable

From: Characterization of global transcription profile of normal and HPV-immortalized keratinocytes and their response to TNF treatment

GENE UniGene ID GENE NAME FUNCTION
ADAMTS1 Hs.534115 disintegrin-like and metalloprotease (reprolysin type) negative regulation of cell proliferation
ARHGEF10 Hs.443460 Rho guanine nucleotide exchange factor (GEF) 10 GTPase activator activity
CD44 Hs.502328 CD44 antigen cell adhesion
CITED1 Hs.40403 Cbp/p300-interacting transactivator transcription regulator activity
CREG Hs.5710 cellular repressor of E1A-stimulated genes 1 cell proliferation
CSTA Hs.518198 cystatin A (stefin A) cysteine protease inhibitor activity
D4S234E Hs.518595 DNA segment on chromosome 4 (unique) 234 expressed sequence dopamine receptor signaling pathway
DHRS3 Hs.289347 dehydrogenase/reductase (SDR family) member 3 fatty acid metabolism
EPB41L1 Hs.437422 erythrocyte membrane protein band 4.1-like 1 structural molecule activity
FLJ20105 Hs.47558 FLJ20105 regulation of transcription
FLJ21511 Hs.479703 FLJ21511 unknown function
FLJ21616 Hs.591836 FLJ21616 regulation of transcription
FLJ30525 Hs.7962 FLJ30525 unknown function
GALNT11 Hs.647109 UDP-N-acetyl-alpha-D-galactosamine transferase activity, transferring glycosyl groups
GC20 Hs.315230 translation factor sui1 homolog regulation of translational initiation
GLDC Hs.584238 glycine dehydrogenase glycine metabolism
GSR Hs.271510 glutathione reductase glutathion metabolism
HBP17 Hs.1690 fibroblast growth factor binding protein 1 regulation of cell proliferation
INHBA Hs.28792 inhibin, beta A cell cycle arrest, negative regulation of immune cell differentiation
JPH3 Hs.592068 junctophilin 3 unknown function
KIAA0368 Hs.368255 KIAA0368 ER-associated protein catabolism
KLK7 Hs.151254 kallikrein 7 (chymotryptic, stratum corneum) epidermis development, proteolysis and peptidolysis, chymotrypsin activity
LCN2 Hs.204238 lipocalin 2 (oncogene 24p3) transporter activity
LXN Hs.478067 latexin enzyme inhibitor activity
MAL2 Hs.201083 T-cell differentiation protein 2 Unknown function
MCM2 Hs.477481 minichromosome maintenance deficient 2 cell cycle
MGC45400 Hs.389734 transcription elongation factor A (SII)-like 8 translation elongation factor activity
MGEA5 Hs.500842 meningioma expressed antigen 5 (hyaluronidase) glycoprotein catabolism
MYO5B Hs.200136 acetyl-Coenzyme A acyltransferase 2 fatty acid metabolism
NMES1 Hs.112242 normal mucosa of esophagus specific 1 unknown function
NMU Hs.418367 neuromedin U neuropeptide signaling pathway, digestion
NT5E Hs.153952 5'-nucleotidase, ecto (CD73) DNA metabolism
OAS1 Hs.524760 2',5'-oligoadenylate synthetase 1 immune response to viral infections
ODC1 Hs.467701 ornithine decarboxylase 1 polyamine biosynthesis
PARVA Hs.607144 parvin, alpha cell adhesion, actin binding
PEX3 Hs.7277 peroxisomal biogenesis factor 3 peroxisome organization
PI3 Hs.112341 protease inhibitor 3, skin-derived (SKALP) elastase-specific inhibitor
PLAU Hs.77274 plasminogen activator chemotaxis
PPGB Hs.517076 protective protein for beta-galactosidase intracellular protein transport
PROS1 Hs.64016 protein S (alpha) cell adhesion, endopeptidase inhibitor activity
PRSS11 Hs.501280 protease, serine, 11 (IGF binding) insulin-like growth facto binding, regulation of cell growth
RARRES1 Hs.131269 retinoic acid receptor responder negative regulation of cell proliferation
RDH-E2 Hs.170673 epidermal retinal dehydrogenase 2 oxidoreductase activity
RPL15 Hs.381219 ribosomal protein L15 protein biosynthesis
RUTBC3 Hs.474914 RUN and TBC1 domain containing 3 unknown function
S100P Hs.440880 S100 calcium binding protein P cell cycle progression and differentiation
SEPT10 Hs.469615 septin 10 cell cycle
SF3B4 Hs.516160 myotubularin related protein 11 inositol or phosphatidylinositol phosphatase activity
SIMP Hs.475812 immunodominant MHC-associated peptides protein amino acid glycosylation
SMOC2 Hs.487200 SPARC related modular calcium binding calcium ion binding
SOD2 Hs.487046 superoxide dismutase 2 age-dependent response to reactive oxygen species, cellular defense response
STAF65 (gamma) Hs.6232 SPTF-associated factor 65 gamma regulation of transcription, DNA- dependent
SYTL3 Hs.436977 synaptotagmin-like 3 intracellular protein transport
TFRC Hs.529618 transferrin receptor (p90, CD71) endocytosis
TGFB1 Hs.645227 transforming growth factor, beta 1 cell proloferation
TPD52 Hs.368433 tumor protein D52 morphogenesis
TPX2 Hs.244580 microtubule-associated protein homolog cell proliferation
TRIM31 Hs.493275 tripartite motif-containing 31 protein ubiquitination, ubiquitin ligase activity
YME1L1 Hs.499145 YME1-like 1 (S. cerevisiae) protein catabolism
ZNF198 Hs.644041 zinc finger protein 198 regulation of transcription, DNA- dependent
  1. *Genes are listed in alphabetical order. The cutoff p-value was set as <10-10.