Table 2 Differentially expressed genes identified by SAM analysis.
Down-regulated in High Cotinine Subjects | Â | Â | Â | |
|---|---|---|---|---|
Gene Symbol | Gene Name | Accession Number | Agilent Probe ID | Mean FC |
HRASLS3 | HRAS-like suppressor 3 | NM_007069 | A_23_P116414 | 1.5 |
CX3CR1 | Chemokine (C-X3-C motif) receptor 1 | NM_001337 | A_23_P407565 | 1.3 |
GPR56 | G protein-coupled receptor 56 | NM_005682 | A_23_P206280 | 1.3 |
PTGDS | Prostaglandin D2 synthase 21kDa (brain) | NM_000954 | A_23_P146554 | 1.3 |
FLJ23262 | Â | BC043173 | A_24_P20996 | 1.2 |
BRD1 | Bromodomain containing 1 | NM_014577 | A_23_P166536 | 1.2 |
BZRAP1 | Benzodiazapine receptor (peripheral) associated protein 1 | NM_004758 | A_23_P152559 | 1.2 |
C1D | Nuclear DNA-binding protein | NM_173177 | A_23_P67992 | 1.2 |
FLJ23262 | Â | BC043173 | A_24_P20996 | 1.2 |
CTCF | CCCTC-binding factor (zinc finger protein) | NM_006565 | A_24_P347704 | 1.2 |
DNAJB6 | DnaJ (Hsp40) homolog, subfamily B, member 6 | NM_058246 | A_24_P63827 | 1.2 |
ENST00000320343 | Â | ENSG00000177197 | A_24_P75688 | 1.2 |
FLJ35696 | Â | NM_207387 | A_23_P368484 | 1.2 |
GNG2 | Guanine nucleotide binding protein (G protein), gamma | NM_053064 | A_32_P208403 | 1.2 |
HS6ST1 | Heparan sulfate 6-O-sulfotransferase 1 | AL831893 | A_24_P8220 | 1.2 |
IKIP | IKK interacting protein | NM_201613 | A_23_P53467 | 1.2 |
KLRK1 | Killer cell lectin-like receptor subfamily K, member 1 | NM_007360 | A_23_P218058 | 1.2 |
MAF | V-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | AF055376 | A_24_P256219 | 1.2 |
MGC61571 | Â | NM_182523 | A_24_P408740 | 1.2 |
MTCBP-1 | Membrane-type 1 matrix metalloproteinase cytoplasmic tail binding protein-1 | NM_018269 | A_23_P148194 | 1.2 |
AL137798 | Â | NM_032723 | A_23_P126486 | 1.2 |
OSBPL5 | Oxysterol binding protein-like 5 | NM_145638 | A_23_P53081 | 1.2 |
PPP1CB | Protein phosphatase 1, catalytic subunit, beta isoform | NM_206877 | A_23_P83414 | 1.2 |
PPP1R12B | Protein phosphatase 1, regulatory (inhibitor) subunit 12B | NM_002481 | A_23_P201790 | 1.2 |
PPP2R2B | Protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform | NM_181678 | A_23_P213620 | 1.2 |
SLC25A20 | Solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 | NM_000387 | A_23_P72025 | 1.2 |
SLC9A3R1 | Solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulator 1 | NM_004252 | A_23_P308519 | 1.2 |
SULF2 | Sulfatase 2 | NM_198596 | A_23_P154605 | 1.2 |
YWHAQ | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide | NM_006826 | A_24_P199905 | 1.2 |
PTGDR | Prostaglandin D2 receptor (DP) | NM_000953 | A_23_P393777 | 1.1 |
Up-regulated in High Cotinine Subjects | Â | Â | Â | |
Gene Symbol | Gene Name | Accesion Number | Agilent Probe ID | Mean FC |
SASH1 | SAM and SH3 domain containing 1 | NM_015278 | A_23_P93442 | 1.4 |
BC107798 | Â | NM_003283 | A_23_P56050 | 1.4 |
AL442066 | Â | AL442066 | A_23_P123645 | 1.3 |
DNAPTP6 | DNA polymerase-transactivated protein 6 | NM_015535 | A_23_P131255 | 1.3 |
C1GALT1 | Core 1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase | NM_020156 | A_23_P252145 | 1.2 |
RGL1 | Ral guanine nucleotide dissociation stimulator-like 1 | NM_015149 | A_23_P115417 | 1.2 |
CTMP | C-terminal modulator protein | NM_176853 | A_23_P149375 | 1.2 |
LOC283174 | Hypothetical protein LOC283174 | NM_001001873 | A_24_P904484 | 1.2 |