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Table 2 Association analysis of tag SNPs used to cover the LD block containing LRAT.

From: A genome-wide association study for late-onset Alzheimer's disease using DNA pooling

SNP ID Position (Mb on Chr 4) Minor Allele Minor Allele Freq Cases Minor Allele Freq Controls Minor Allele Freq 1958 p Cases vs MRC Cons OR Cases vs MRC Cons (95% CI) p Cases vs Comb Cons OR Cases vs Comb Cons (95% CI)
Rs12501328 156,019,936 G 0.10 0.08 0.07 0.02661 1.27 (1–1.6) 0.0032 1.32 (1.1 – 1.6)
Rs201825 156,024,540 C 0.52 0.44 0.46 1.65E-06 1.34 (1.2–1.5) 6.12E-07 1.3 (1.2 – 1.4)
Rs201824 156,026,315 T 0.40 0.35   0.00066 1.24 (1.1–1.4) N/A N/A
Rs201823 156,026,490 G 0.40 0.35 0.37 0.00042 1.24 (1.1–1.4) 0.0004 1.21 (1.1 – 1.3)
Rs156500 156,034,920 C 0.13 0.11   0.09457 1.17 (1–1.4) N/A N/A
Rs156501 156,035,950 A 0.22 0.19 0.19 0.01635 1.2 (1–1.4) 0.0058 1.2 (1.1 – 1.4)
Rs149225 156,040,821 C 0.42 0.40   0.34900 1.06 (0.9–1.2) N/A N/A
  1. For descriptions see Table 1. OR – Odds Ratio, N/A – test not conducted.