Table 7 AM genes with concordant transcriptome and proteome dysregulation in cancer

BREAST

BNIP1+, CSE1L+, EP300+, IL18+, LGALS3BP+, NTRK1+, STAT1+, TP53+, CD44-, RELA-, STAT5A-, STAT5B-

COLON

CDKN2A+, HTATIP2-, PTPN13-

KIDNEY

AATF+, ANGPTL4+, CASP10+, CASP9+, CCNE1+, CD44+, LGALS1+, LGALS3+, RIPK1+

LEUKEMIA

AATF+, ACIN1+, BAK1+, BCL2+, BCL2L13+, CASP2+, CCNE1+, CDC2L1+, CSF2RB+, CYCS+, FADD+, GRB2+, IL1A+, JAK1+, MAPK1+, NMI+, STAT1+, STAT3+, TRAF6+, CREBBP-, GZMB-, IL6ST-, MCL1-, TNFSF10-

LIVER

BAK1+, CD44+, EP300+, LGALS1+, LGALS3+, MAPK1+, TNFRSF1B+, DAP3-

LUNG

BAK1+, CD44+, EP300+, LGALS1+, LGALS3+, MAPK1+, TNFRSF1B+, DAP3-

NEUROBLASTOMA

ACIN1+, BBC3+, BCL2+, BID+, BIRC5+, CASP6+, CCNE1+, CHUK+, CSE1L+, CUL4B+, CYCS+, DAXX+, GRB2+, HRAS+, IL1R1+, MAPK8+, MOAP1+, PDCD4+, PYCARD+, RB1+, TRAF2+, AKT1-, ANGPTL4-, ATM-, CASP8-, CLU-, CREBBP-, CUL3-, DFFB-, HTATIP2-, MMP11-, NFKBIA-, NTRK1-

OVARY

ATM+, B4GALT1+, BAK1+, BAX+, NTRK1+, PIK3R1+, STAT1+

PANCREAS

BAD+, CD44+, LGALS3+, LGALS3BP+, RELA+, SRC+, STAT1+, STAT3+, CLU-, PDCD4-

PROSTATE

BAD+, BCL10+, CASP10+, CUL3+, CYCS+, FADD+, JAK1+, MALT1+, CD44-, LGALS3-, LGALS3BP-

SKIN

RIPK1+, TRAF2+, CD44-

STOMACH

BCL10+, CD44+, CDKN2A+, SRC+, STAT1+, STAT3+, PDCD4-