Detailed transcriptome atlas of the pancreatic beta cell

BMC Medical Genomics

Table 2 Expression levels of select transcription factors in the MPSS dataset

Gene id	Symbols	Description	Islet1	Islet2	Average
3110	HLXB9	Homeobox HB9	49	66	57
6927	HNF1	Transcription factor 1, hepatic	46	0	23
3170	HNF3	Forkhead box A2	63	232	147
6925	HNF4	Transcription factor 4	14	23	18
3175	HNF6	One cut domain, family member 1	6	3	4.5
3651	IPF1	Insulin promoter factor 1	38	48	43
3670	ISL1	ISL1 transcription factor, LIM/homeodomain	114	82	98
389692	MAFA	v-maf oncogene homolog A	169	80	124
4760	NEUROD1	Neurogenic differentiation 1	12	66	39
4821	NKX2-2	NK2 transcription factor related, locus 2	205	36	120
4825	NKX6-1	NK6 transcription factor related, locus 1	67	90	78
5080	PAX6	Paired box gene 6	418	713	565

'Gene id' = Entrez Gene ids, 'Symbols' = HUGO names for each gene, 'Description' = detailed gene name, 'Islet1' = tpm counts in MPSS sample from islet 1, 'Islet2' = tpm counts in MPSS sample from islet 2, 'Average' = average tpm counts in MPSS sample in both samples

ISSN: 1755-8794