Pathways | Upregulated genes (1036) | Hypomethylated and upregulated genes (55) | Fisher's Exact Test p-values§ | |||
---|---|---|---|---|---|---|
 | Input genes in pathway | Corrected p-value | Input genes in pathway | Genes in pathway | Corrected p-value |  |
Glioma | 6 | 1.60E-02 | 3 | PIK3R3, PDGFRA, E2F1 | 8.69E-05 | 0.003* |
Melanoma | 5 | 6.00E-02 | 3 | PIK3R3, PDGFRA, E2F1 | 3.91E-04 | 0.001* |
Pancreatic cancer | 8 | 3.30E-02 | 3 | PIK3R3, E2F1, TGFBR2 | 1.10E-03 | 0.006* |
Prostate cancer | 9 | 3.80E-02 | 3 | PIK3R3, PDGFRA, E2F1 | 1.20E-03 | 0.009* |
Colorectal cancer | 6 | 1.84E-01 | 3 | PIK3R3, E2F1, TGFBR2 | 1.50E-03 | 0.003* |
Chronic myeloid leukemia | 6 | 1.75E-01 | 3 | PIK3R3, E2F1, TGFBR2 | 2.50E-03 | 0.003* |
Non-small cell lung cancer | 2 | 6.00E-01 | 2 | PIK3R3, E2F1 | 2.46E-02 | 0.003* |
Phosphatidylinositol signaling system | 4 | 5.32E-07 | 1 | PIK3R3 | 2.23E-12 | 0.196 |
Gap junction | 5 | 4.12E-02 | 1 | PDGFRA | 1.06E-05 | 0.239 |
Focal adhesion | 17 | 8.76E-03 | 2 | PIK3R3, PDGFRA | 9.13E-05 | 0.226 |
MAPK signaling pathway | 8 | 5.90E-02 | 2 | PDGFRA, TGFBR2 | 9.73E-05 | 0.063 |
TGF-beta signaling pathway | 6 | 1.13E-01 | 1 | TGFBR2 | 5.67E-04 | 0.280 |
Adherens junction | 7 | 4.44E-02 | 1 | TGFBR2 | 6.41E-03 | 0.318 |
Regulation of actin cytoskeleton | 15 | 8.57E-02 | 3 | PIK3R3, PDGFRA, MSN | 6.73E-03 | 0.051 |
Calcium signaling pathway | 5 | 2.65E-01 | 1 | PDGFRA | 1.70E-02 | 0.239 |
Leukocyte transendothelial migration | 9 | 3.98E-02 | 2 | PIK3R3, MSN | 1.92E-02 | 0.078 |