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Figure 1 | BMC Medical Genomics

Figure 1

From: Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing

Figure 1

Sequence recovery. Extracting the actual cDNA insert from a sequencing construct. The dark grey bars show the total number of reads in each of the four samples. Medium grey bars show the number of reads where the insert could be reliably recognized using an HMM, light grey bars show the number of inserts recognized by perfect string matching to the expected flanking region. Though a sizable fraction of the raw data is lost due to errors in flanks in all cases, the HMM approach recovers a much larger part of the data.

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