Gene | Location | Affymetrix Probeset ID | SNP Marker | Effect Size | LOD | p-value |
---|
IRF5 | 7q32 | 205468_s_at | rs4728142 | -0.521 | 9.527 | 3.50E-11 |
IRF5 | 7q32 | 205468_s_at | rs10488630 | -0.381 | 4.937 | 1.90E-06 |
- The top 25 Diagnosis × Probeset transcripts were examined in mRNA by SNP Browser software [28, 30, 29] to identify SNPs associated with candidate gene expression from LCLs. This table lists the SNP associated with each Affymetrix U133 probeset ID, with the associated effect size, logarithm of the odds (LOD) score and p-value that were obtained from mRNA by SNP Browser data.