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Table 1 FFPE Samples used in the study

From: High quality copy number and genotype data from FFPE samples using Molecular Inversion Probe (MIP) microarrays

Institution

Tumor sample type

Age range of Blocks (years)

Number of FFPE tumors

Number of FFPE normals

Other features

MD Anderson set 1

Breast cancer

< 3

8

9

 

MD Anderson set 2

Breast cancer

5 – 22

27

18

 

UCSF

Liver metastases from colorectal

5 – 28

9

9

Matching frozen tumors and normals available

Dana Farber

Invasive breast cancer

5 – 6

6

13

Microdissected

CRUK

Colorectal

0.5 – 5

17

16

Matching frozen tumors available; macrodissected

CHTN

Bladder, colorectal, kidney, liver

1 – 3

13

15

Matching frozen tumors and normals available

Leader

Kidney

3 – 4

13

12

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