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Table 2 Summary of Gene Regulation

From: Impact of RNA degradation on gene expression profiling

Comparison

#Over-Represented

#Under-Represented

#Normally-Represented

TP1 vs Control

11

4

40985

TP2 vs Control

22

51

40937

TP3 vs Control

65

210

40725

  1. All genes are grouped by the type of regulation for all comparisons. To filter differentially expressed genes we used the following thresholds: fdr <5% and fold change greater 2 or less than 1/2.