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Table 2 Top-ranked genes associated with carcinoma stage in four ovarian and colorectal cancers

From: Multi-cancer computational analysis reveals invasion-associated variant of desmoplastic reaction involving INHBA, THBS2 and COL11A1

Probe Seta Gene Log FC
37892_at COL11A1 3.94
217428_s_at COL10A1 3.55
204320_at COL11A1 3.39
210809_s_at POSTN 3.14
206439_at EPYC 3.12
219087_at ASPN 2.99
205941_s_at COL10A1 2.88
203083_at THBS2 2.81
209955_s_at FAP 2.73
215446_s_at LOX 2.63
204051_s_at SFRP4 2.53
210511_s_at INHBA 2.52
215646_s_at VCAN 2.50
218469_at GREM1 2.48
209758_s_at MFAP5 2.42
218468_s_at GREM1 2.35
212353_at SULF1 2.34
221730_at COL5A2 2.34
211571_s_at VCAN 2.33
204619_s_at VCAN 2.33
205713_s_at COMP 2.31
221731_x_at VCAN 2.27
204620_s_at VCAN 2.26
201150_s_at TIMP3 2.25
221729_at COL5A2 2.24
212354_at SULF1 2.23
212489_at COL5A1 2.22
213790_at ADAM12 2.21
212488_at COL5A1 2.20
201147_s_at TIMP3 2.19
204457_s_at GAS1 2.17
206026_s_at TNFAIP6 2.14
202952_s_at ADAM12 2.12
202766_s_at FBN1 2.08
212344_at SULF1 2.07
202311_s_at COL1A1 2.05
209335_at DCN 2.01
  1. aAffymetrix probe sets
  2. All genes have Bonferroni corrected p < 10-3 in each of the four data sets.