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Table 6 Top-ranked methylation sites in MAF signature in the TCGA ovarian cancer data set

From: Multi-cancer computational analysis reveals invasion-associated variant of desmoplastic reaction involving INHBA, THBS2 and COL11A1

Methylation site MI Hyper-/Hypomethylated
PRAME 0.223 Hyper
SNAI1 0.183 Hyper
KRT7 0.158 Hyper
RASSF5 0.157 Hyper
FLJ14816 0.155 Hyper
PPL 0.155 Hyper
CXCR6 0.153 Hypo
SLC12A8 0.148 Hyper
NFATC2 0.148 Hyper
HOM-TES-103 0.147 Hypo
ZNF556 0.147 Hyper
OCIAD2 0.146 Hyper
APS 0.142 Hyper
MGC9712 0.139 Hyper
SLC1A2 0.136 Hyper
HAK 0.131 Hypo
C3orf18 0.13 Hyper
GMPR 0.13 Hyper
CORO6 0.128 Hyper
  1. All methylated genes have multiple-test corrected p < 10-16 in terms of their association with COL11A1.