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Table 2 Genes that had a log2-fold change > |0.5| and a t-test p-value < 0.05.

From: Expression profiling of formalin-fixed paraffin-embedded primary breast tumors using cancer-specific and whole genome gene panels on the DASL®platform

  DASL 1.5K DASL 24K
Symbol p-value log2-fold change p-value log2-fold change
ERBB2 0.00002 1.560 0.00001 1.522
TOP2A 0.00238 0.820 0.02047 1.260
CCNA2 0.00275 0.880 0.03336 0.572
FOS 0.01719 -0.834 0.01814 -0.848
WNT5A 0.01779 -0.697 0.01086 -0.873
GRB7 0.01802 0.816 0.00027 1.924
CDC2 0.02282 0.588 0.00946 0.886
BIRC5 0.03098 0.721 0.04624 0.738
MST1R 0.00142 -0.855 0.18625 -0.715
CTSL1 0.00504 0.565 0.46187 0.173
KLF6 0.00629 -0.530 0.62433 0.078
VAV2 0.00873 -0.612 0.98142 0.005
ELK3 0.00877 -0.541 0.31326 -0.161
AREG 0.01172 1.089 0.04873 0.227
RASA1 0.01268 0.831 0.70107 -0.048
LIG4 0.01291 -0.526 0.66921 0.078
XRCC2 0.01457 0.622 0.02547 0.307
RAD52 0.01908 -0.530 0.60233 -0.117
IGF2 0.02324 -0.748 0.02119 -0.477
TFAP2C 0.03411 0.633 0.01484 0.339
TYMS 0.04853 0.582 0.06550 0.582
TNFSF10 0.04884 0.533 0.06095 0.562
CDKN2D 0.33534 0.190 0.00431 0.501
IGFBP6 0.05152 -0.289 0.00447 -0.627
BCL6 0.00786 -0.417 0.00866 -0.520
CCNE1 0.86111 0.036 0.01106 0.629
BMP4 0.06932 -0.786 0.01395 -0.815
PTCH1 0.64341 -0.122 0.01807 -0.589
PBX1 0.13206 0.276 0.01853 0.550
EGR1 0.09200 -0.232 0.01887 -0.646
RAB8A 0.88338 -0.027 0.02049 0.603
BLM 0.24745 0.355 0.02160 0.875
MYCN 0.45713 0.262 0.02168 1.213
MPL 0.00606 -0.460 0.02810 -0.551
TGFB2 0.29992 -0.332 0.03025 -0.979
RAD54L 0.94663 0.013 0.03996 0.642
MAP3K8 0.73556 -0.050 0.04151 0.683
CDC25C 0.47633 0.197 0.04316 0.728
HMMR 0.12330 0.502 0.04816 0.779
  1. Note: Italicized values do not pass the p-value or fold change threshold.