Skip to main content

Table 3 Probes from the 24K panel that had a log2-fold change > |1.0| and a t-test p-value < 0.01.

From: Expression profiling of formalin-fixed paraffin-embedded primary breast tumors using cancer-specific and whole genome gene panels on the DASL®platform

Symbol p-value log2-fold change
ERBB2* 0.0000001 1.458
ERBB2* 0.00004 2.017
GRB7 0.00008 1.851
C17ORF37 0.00009 1.131
PERLD1 0.00011 1.966
GRB7 0.00028 1.817
ASF1B 0.00041 1.306
PAPSS2 0.00057 1.257
GRB7 0.00091 2.119
C13ORF3 0.00095 1.073
CDC6 0.00099 1.756
MND1 0.00119 1.178
C5ORF4 0.00123 -1.203
DUSP15 0.00167 -1.456
FAM54A 0.00178 1.223
ERBB2* 0.00179 1.063
PSMD3* 0.00184 1.087
KCND3 0.00199 -1.359
PLEKHB1 0.00204 -1.133
ITIH4 0.00207 -1.062
SMARCD3 (BAF60C)* 0.00234 -1.122
LOC441376 0.00259 -1.966
PLP1 0.00297 -1.440
GLT25D2* 0.00301 -1.074
MAPT 0.00325 -1.352
CA2 (carbonic anhydrase II)* 0.00341 -1.446
CCNE1 0.00367 1.189
VAX2 0.00389 -1.229
TXLNB* 0.00395 -1.088
NUSAP1 0.00409 1.141
OSTALPHA 0.00420 2.421
IGFN1 0.00435 -1.251
CEP55 0.00448 1.211
DIAPH3* 0.00473 1.052
CCDC48 0.00521 -1.445
CCDC153 0.00551 -1.048
PMP2 0.00551 -1.185
MGC20983 0.00579 -1.247
AURKB* 0.00595 1.025
FLJ25770 0.00624 -1.259
EXO1* 0.00626 1.042
HYDIN 0.00643 -1.318
DTL* 0.00676 1.251
ATP6V0A4 0.00787 1.940
S100A7* 0.00787 3.327
ARTN 0.00824 -1.379
EME1 (MMS4L)* 0.00842 1.021
SPAG6* 0.00853 -2.443
POLQ (DNA polymerase kappa) * 0.00882 1.090
ROBO2 0.00941 -1.679
PLP1 0.00946 -1.190
ZNF695 0.01000 1.414
  1. *Genes that cluster around MYC, P53, and ESR1 and indicated by red circles in Figure 5 a-b.