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Table 1 Results of alignment to intragenic and TIC targets

From: Deep RNA sequencing analysis of readthrough gene fusions in human prostate adenocarcinoma and reference samples

    

Overhang 8

 

Overhang 11

 
 

Length

Total reads

Intragenic

Pct

TIC

Pct

Intragenic

Pct

TIC

Pct

T1

33

30,797,857

966,447

3.1

1329

.0043

655,926

2.1

338

.0011

T2

33

32,029,444

1,216,580

3.8

1104

.0034

826,518

2.7

272

.0008

T3

33

65,479,803

2,171,327

3.3

2499

.0038

1,476,928

2.3

860

.0013

N1

50,75

33,509,416

3,862,551

11.5

1229

.0037

3,391,849

10.1

925

.0027

N2

50

33,125,582

2,925,272

8.8

945

.0029

2,449,004

7.4

559

.0017

N3

33

30,987,067

1,190,231

3.8

1213

.0039

810,039

2.6

507

.0016

HBR

50

53,238,798

3,487,753

6.6

1704

.0032

2,930,589

5.5

960

.0018

UHR

50

59,561,348

5,301,691

8.9

2377

.0040

4,445,658

7.5

1335

.0022

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BMC Medical Genomics

ISSN: 1755-8794

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