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Table 2 Differential Expression Analysis

From: Identification of SERPINA1 as single marker for papillary thyroid carcinoma through microarray meta analysis and quantification of its discriminatory power in independent validation

SYMBOL RefSeq logFC adj.P.Val Sens. Spec. KEGGID
SERPINA1 NM_000295, NM_001002235, NM_001002236 3.30 7.81e-39 0.98 1.00 04610
PROS1 NM_000313 2.12 8.89e-34 0.98 1.00 04610
LRP4 NM_002334 2.80 8.89e-34 1.00 0.96 NA
NPC2 NM_006432 1.29 5.83e-33 1.00 0.94 04142
LAMB3 NM_000228, NM_001017402 2.46 5.11e-31 0.96 1.00 04510, 04512, 05200, 05222
DPP4 NM_001935 2.86 6.96e-31 0.98 0.98 NA
SDC4 NM_002999 1.68 5.50e-30 0.96 0.96 04512, 04514
IPCEF1 NM_015553 -2.10 2.88e-29 1.00 0.00 NA
QPCT NM_012413 2.09 3.00e-29 0.98 1.00 NA
MPPED2 NM_001584 -2.28 7.73e-29 1.00 0.00 NA
TIMP1 NM_003254 1.85 1.48e-27 0.96 0.94 NA
TFF3 NM_003226 -3.42 2.07e-27 1.00 0.00 NA
PRSS23 NM_007173 1.48 2.32e-27 0.98 0.98 NA
MET NM_000245 1.64 2.37e-27 0.94 0.98 04060, 04144, 04360, 04510, 04520, 05120, 05200, 05210, 05211, 05218
CDH3 NM_001793 2.72 3.45e-27 0.96 0.94 04514
GGCT NM_024051 1.21 2.74e-26 0.98 0.92 00480
PDLIM4 NM_003687 2.21 3.37e-26 0.96 0.98 NA
KRT19 NM_002276 2.33 3.40e-25 0.98 0.98 NA
CITED1 NM_004143 3.17 4.42e-25 0.94 0.96 NA
CHI3L1 NM_001276 3.50 4.42e-25 0.96 0.90 NA
  1. The first 20 entries in the toptable of differential expression in meta analysis data, including log2 fold changes (logFC) and Benjamini-Hochberg adjusted p-values (adj.P.Value) as calculated by the limma-software. Sensitivity and Specificity are given for the distinction of PTC vs NG at maximum accuracy. Annotational information like gene symbols, consensus sequence identifiers (RefSeq) and KEGG Pathway IDs are shown.