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Table 3 Correlation of gain and loss frequencies* on cytobands among CGH, vCGH Viterbi and vCGH Posterior on DLBCL dataset

From: Virtual CGH: an integrative approach to predict genetic abnormalities from gene expression microarray data applied in lymphoma

 

CGH

vCGH Viterbi

vCGH Posterior

    
   

p = 0.5

p = 0.6

p = 0.7

p = 0.8

p = 0.9

CGH

1

0.860

0.804

0.811

0.821

0.830

0.843

vCGH Viterbi

0.777

1

0.975

0.974

0.974

0.971

0.964

vCGH Posterior p = 0.5

0.653

0.941

1

0.996

0.991

0.985

0.975

p = 0.6

0.671

0.945

0.994

1

0.996

0.99

0.98

p = 0.7

0.683

0.948

0.987

0.993

1

0.995

0.987

p = 0.8

0.696

0.951

0.980

0.988

0.993

1

0.992

p = 0.9

0.713

0.943

0.966

0.975

0.981

0.988

1

  1. *Gain was shown in the bottom left triangles, and loss in the top right triangles.
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BMC Medical Genomics

ISSN: 1755-8794

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