Table 1 Number of failed convergence simulations out of 500 using CNVassoc and CNVtools according to inferring copy number uncertainty Q and number of cases N.
N= 2000 | N= 500 | |||
|---|---|---|---|---|
Q | CNVassoc | CNVtools | CNVassoc | CNVtools |
6.0 | 0 | 0 | 0 | 15 |
5.5 | 0 | 0 | 0 | 20 |
5.0 | 0 | 0 | 0 | 65 |
4.5 | 0 | 0 | 0 | 92 |
4.2 | 0 | 0 | 0 | 187 |
4.0 | 0 | 0 | 0 | 246 |
3.7 | 0 | 0 | 0 | 294 |
3.5 | 0 | 1 | 0 | 299 |
3.2 | 0 | 13 | 212 | 389 |
3.0 | 0 | 65 | 331 | 400 |