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Table 3 Genes overexpressed in macrodissected gastric cancer at feature selection P < 10-6

From: Distinctions in gastric cancer gene expression signatures derived from laser capture microdissection versushistologic macrodissection

Gene

FC1

Gene

FC

LY6E

24.42

SRM

6.7

IL8

22.7

NGLY1

6.7

CA12

20.0

RHOB

6.3

SBNO2

19.2

ACTN1

5.9

UBE2S

17.2

LOXL2

5.9

CYR61

17.2

COL5A2

5.9

ANGPT2

15.9

TRIM28

5.6

COL6A2

14.3

218982_s_at

5.6

BOP1

13.2

C7orf44

5.3

COL1A1

13.2

UBE2C

5.3

LPL

13.0

CEP76

5.3

MFGE8

12.8

BIRC5

5.3

APOE

12.2

PNO1

5.0

G6PC3

10.9

FSTL1

5.0

215900_at

10.3

GRINA

4.8

NUP62

10.0

MRTO4

4.8

MRPL4

10.0

STC1

4.8

GNL3L

10.0

MRPL12

4.5

MCAM

9.1

FKBP1A

4.5

PDLIM7

9.1

IFI30

4.5

216472_at

9.1

KPNA6

4.3

ACTN1

9.1

216532_x_at

4.3

BYSL

9.1

CENPI

4.2

GNAI2

8.3

PPM1G

4.2

NCAPH2

8.3

ICT1

3.7

CD14

8.3

SFRS14

3.6

EXOSC4

8.3

CTPS

3.6

OBFC2B

8.3

IMP4

3.3

PPP1R15A

7.7

UBE2G2

3.2

COL1A2

7.7

ISG20L2

3.2

GPX1

7.7

EIF4A1

3.1

MIF

7.7

HDGF

2.6

NME1

7.1

PSMD14 2.6

 

PPIL2

7.1

220856_x_at

2.4

CCDC85B

7.1

CNOT3

2.4

SPARC

6.7

GLT25D1

2.0

C8orf55

6.7

  
  1. 1fold change, defined by the expression ratio of cancer to normal (= cancer/normal)
  2. 2All these genes had false discovery rate <0.001.