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Table 4 Genes underexpressed in micro- and macro-dissected gastric cancer at feature selection P < 10-6

From: Distinctions in gastric cancer gene expression signatures derived from laser capture microdissection versushistologic macrodissection

Microdissected

 

Macrodissected

 

Gene

FC1

Gene

FC

HPGD

-25.02

208498_s_at

-11.1

HRASLS2

-20.0

SIDT2

-7.7

ABCC3

-20.0

MUC5AC

-5.9

SLC25A37

-16.7

CTAGE5

-5.0

ABHD2

-14.3

GNA11

-3.8

VIPR1

-10.0

ARFIP1

-3.4

CYTIP

-9.1

214316_x_at

-3.3

GALNT6

-9.1

222149_x_at

-3.3

SULT1A2

-9.1

  

OAS1

-8.3

  

PDCD4

-7.1

  

NR3C2

-7.1

  

DOCK6

-6.3

  

SULT1A1

-5.9

  

ZFYVE26

-5.9

  

213212_x_at

-5.6

  

DSCR3

-5.3

  

TMEM131

-5.3

  

ECHDC2

-5.0

  

DENND1B

-5.0

  

KIAA0141

-4.8

  

RNF103

-4.8

  

PDCD4

-4.5

  

CABIN1

-4.5

  

222371_at

-4.3

  

RRBP1

-4.0

  

CC2D1A

-3.8

  

216438_s_at

-3.8

  

SGSM3

-3.8

  

ARPC2

-3.7

  

TRAK1

-3.6

  

GNA11

-3.6

  

PAFAH1B1

-3.4

  

CNDP2

-3.2

  

SPOP

-3.1

  

PARP4

-3.1

  

ERLIN1

-2.9

  
  1. 1fold change, defined by the negative of the expression ratio of normal to cancer (= - (normal/cancer))
  2. 2All these genes had false discovery rate <0.001.
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BMC Medical Genomics

ISSN: 1755-8794

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