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Table 5 Chi-square test results for stem cell

From: Allele-specific disparity in breast cancer

A. allelic Disparity - Score 75

Gene level

 

Non-Stem Cell genes

Stem Cell genes

P-value

No Disparity

11315 (95%)

2514 (95%)

0.8008

Disparity

615 (5%)

140 (5%)

 

Total

11930 (100%)

2654 (100%)

 

B. Amplification and Deletion

Gene level

 

Non-Stem Cell genes

Stem Cell genes

P-value

Amplification

5594 (51%)

1159 (47%)

0.000541

Deletion

5432 (49%)

1313 (53%)

 

Total

11026 (100%)

2472 (100%)

 
  1. A 2x2 table showing observed results from the allelic disparity (A) and amplification or deletion (B) gene lists.