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Table 4 Functions and canonical pathways as differentially expressed down-regulated genes in ob/ob vs. WT, with no significant changes in POKO vs. WT mice

From: Early peroxisome proliferator-activated receptor gamma regulated genes involved in expansion of pancreatic beta cell mass

Top Bio Functions

  

Name

p-value

# Molecules

Diseases and Disorders

  

Dermatological Diseases and Conditions

3.01E-05 - 4.21E-02

37

Genetic Disorder

3.01E-05 - 4.21E-02

91

Cancer

9.80E-05 - 4.21E-02

170

Developmental Disorder

6.95E-04 - 4.21E-02

11

Gastrointestinal Disease

1.48E-03 - 4.21E-02

71

Molecular and Cellular Functions

  

Lipid Metabolism

4.46E-07 - 4.21E-02

50

Small Molecule Biochemistry

4.46E-07 - 4.21E-02

71

Vitamin and Mineral Metabolism

4.46E-07 - 4.21E-02

23

Cell-To-Cell Signaling and Interaction

1.48E-04 - 4.21E-02

63

Cellular Assembly and Organization

1.48E-04 - 4.21E-02

46

Physiological System Development and Function

  

Tumor Morphology

9.80E-05 - 4.21E-02

22

Hair and Skin Development and Function

1.37E-03 - 4.21E-02

26

Organ Development

1.37E-03 - 4.18E-02

35

Digestive System Development and Function

1.50E-03 - 1.95E-02

11

Organismal Development

1.50E-03 - 4.18E-02

26

Top Canonical Pathways

  

Name

p-value

Ratio

Biosynthesis of Steroids

1.96E-04

7/128(0.055)

HER-2 Signaling in Breast Cancer

3.41E-03

9/79 (0.114)

Tight Junction Signaling

9.59E-03

13/167 (0.078)

Fatty Acid Biosynthesis

1.23E-02

3/51 (0.059)

ERK5 Signaling

1.26E-02

7/71 (0.099)

  1. Functions and canonical pathways identified by IPA as differentially expressed down regulated genes in islets from ob/ob vs. WT mice (fold change ≥ 1; P ≤ 0.05), with no significant changes in islets from POKO vs. WT mice.
  2. Note: p-value was calculated using the Benjamini-Hochberg method of multiple testing correction. In the case of canonical pathways "Ratio" indicates the number of differentially expressed genes in a given pathway, divided by total number of genes that make up that pathway.