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Table 5 Mean expression values of differentially expressed genes (time point 0 hours)

From: Batch correction of microarray data substantially improves the identification of genes differentially expressed in Rheumatoid Arthritis and Osteoarthritis

   RA OA
Symbol GCID Without BC With BC Change (%) Without BC With BC Change (%)
COL1A1 GC17M045617_at 10.663 10.636 -0.25 9.793 9.852 +0.60
COL1A2 GC07P093861_at 13.894 13.895 +0.01 13.544 13.562 +0.13
COL3A1 GC02P189547_at 13.616 13.599 -0.12 12.937 12.967 +0.23
COL5A2 GC02M189604_at 11.664 11.659 -0.04 10.841 10.852 +0.10
COL11A1 GC01M103055_at 8.141 8.373 +2.84 6.470 6.230 -3.70
BGN GC0XP152413_at 10.201 10.131 -0.68 8.912 8.995 +0.93
TINAGL1 GC01P031814_at 6.580 6.742 +2.46 6.277 6.125 -2.42
COL27A1 GC09P115957_at 7.454 7.463 +0.12 6.688 6.703 +0.23
  1. Mean expression values of differentially expressed genes of interest in RA and OA patients with and without BC (time point 0 hours); there are only very limited changes of the means in either RA or OA (up to 3.7%). For the full data of all stimuli and time points see Additional file 1: Table S1.
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BMC Medical Genomics

ISSN: 1755-8794

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