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Table 1 Challenges of integrating ES/WGS in clinical practice

From: Patient-controlled encrypted genomic data: an approach to advance clinical genomics

Meaningful patient informed-consent may not be feasible

Complex medical and social implications of the test results,

Possibility of incidental findings,

Multiple findings of uncertain clinical significance,

Insurance companies do not reimburse pre-testing counselling for ES/WGS

Multiple issues to discuss leading to prohibitive requirements in time & resources

Potential emotional distress over disease risk even among healthy individuals

Genomic information is a powerful personal identifier

Raising concerns about privacy, confidentiality, genetic discrimination

Very large amounts of genetic information generated

Limited number of clinical geneticists for data interpretation and clinical care

Substantial time and cost for data analysis and genetic counselling

Dynamic/evolving nature of the interpretation as new knowledge is gained

Duty to re-contact patients as knowledge changes over time

Shift from the present “phenotype-first” medical model to a “data-first” model.

Currently, genetic risk assessment is restricted to individuals at increased risk based on family history or clinical presentation (ensuring the necessary genomic background), or newborn screening programs meeting specific criteria.

Can we predict the impact of even known pathogenic variants outside this setting?

Is there adequate evidence to suggest that a departure from these standards will be beneficial to society?