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Table 1 Interactions between HIV-1 proteins and 9 “key regulatory” genes

From: Genome-wide search for the genes accountable for the induced resistance to HIV-1 infection in activated CD4+ T cells: apparent transcriptional signatures, co-expression networks and possible cellular processes

Profiles

Genes

HIV-1 proteins

Mode of interactions

Bup

FN1

Env

binds

Gag-Pol

cleaves

Tat

competes with, modulated by, up-regulates

Nef

up-regulates

LAMB3

Tat

up-regulates

MYH10

Gag-Pol

cleaves

TGM5

Env

interacts with, modified by

VEGFA

Env

modulates

Tat

cooperates with, induces release of

Bdown

PRKCZ

Env

interacts with, inhibits, regulated by, up-regulates

Gag-Pol

inhibited by, phosphorylated by

Tat

Activates, regulated by, phosphorylated by

PdownBup

FLJ22814

Nef

up-regulates

PupBdown

MGAT5B

Env

processed by

SMPD3

Env

activates