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Table 3 Top correlations between genes and NCI in each brain region

From: Systems analysis of human brain gene expression: mechanisms for HIV-associated neurocognitive impairment and common pathways with Alzheimer’s disease

Frontal cortex

Basal ganglia

White matter

Gene name

R

P-value*

Gene name

R

P-value*

Gene name

R

P-value*

GINS1

−0.80

0.0004

TP53BP2

0.85

0.00006

GNAZ

0.84

0.00009

ACADM

0.77

0.0007

COQ10A

0.82

0.0002

NIPSNAP3A

−0.82

0.0002

ATAD3B

0.76

0.0009

GINS2

−0.81

0.0003

ID2

−0.82

0.0002

C8orf48

0.76

0.0011

PCDHB6

−0.79

0.0005

ADO

0.80

0.0003

EFTUD2

−0.76

0.0011

RHOJ

0.78

0.0006

CHADL

0.79

0.0005

CLUAP1

−0.75

0.0013

LOC550631

−0.78

0.0006

GRK6

0.78

0.0006

   

CADM1

0.78

0.0007

FBXL13

−0.78

0.0006

   

FECH

−0.76

0.001

ARHGAP22

0.77

0.0007

   

SFRS1

0.75

0.0011

CHST12

0.77

0.0008

      

DAP

−0.76

0.0009

      

PASK

−0.76

0.0010

      

C9orf142

0.76

0.0011

  1. * p-values shown are not corrected for multiple comparisons.
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BMC Medical Genomics

ISSN: 1755-8794

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