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Table 3 Top correlations between genes and NCI in each brain region

From: Systems analysis of human brain gene expression: mechanisms for HIV-associated neurocognitive impairment and common pathways with Alzheimer’s disease

Frontal cortex Basal ganglia White matter
Gene name R P-value* Gene name R P-value* Gene name R P-value*
GINS1 −0.80 0.0004 TP53BP2 0.85 0.00006 GNAZ 0.84 0.00009
ACADM 0.77 0.0007 COQ10A 0.82 0.0002 NIPSNAP3A −0.82 0.0002
ATAD3B 0.76 0.0009 GINS2 −0.81 0.0003 ID2 −0.82 0.0002
C8orf48 0.76 0.0011 PCDHB6 −0.79 0.0005 ADO 0.80 0.0003
EFTUD2 −0.76 0.0011 RHOJ 0.78 0.0006 CHADL 0.79 0.0005
CLUAP1 −0.75 0.0013 LOC550631 −0.78 0.0006 GRK6 0.78 0.0006
    CADM1 0.78 0.0007 FBXL13 −0.78 0.0006
    FECH −0.76 0.001 ARHGAP22 0.77 0.0007
    SFRS1 0.75 0.0011 CHST12 0.77 0.0008
       DAP −0.76 0.0009
       PASK −0.76 0.0010
       C9orf142 0.76 0.0011
  1. * p-values shown are not corrected for multiple comparisons.