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Table 3 Gene cluster enrichment (p-values) of tissue-specific genes, as well as of IM and/or SPEM related genes

From: Transcriptome signatures in Helicobacter pylori-infected mucosa identifies acidic mammalian chitinase loss as a corpus atrophy marker

Gene list

Gene cluster

C1

C2.1

C2.2

C3

C4

A1

A2

A3

Cardiac/Fundic a

0.92c

0.92

0.92

1

7.42 x10 -06

1

1

0.92

Pyloric a

1

0.68

1

1

0.10

1

1

0.68

Small Intestinal a

1

1.81 x10 -26

2.57 x10 -02

1

0.82

0.82

1

0.23

Colonic a

1

8.78 x10 -12

7.67 x10 -03

1

1

0.72

1

0.35

IM up b

1

1.96 x10 -111

1.21 x10 -07

1

1

0.97

1

1

IM/SPEM up b

1

5.25 x10 -04

6.16 x10 -07

1

1

1

1

1

IM down b

1

1

1

1

5.86 x10 -37

1

0.99

1

  1. aP-values less than 0.05 are displayed in bold text. The gene lists were obtained from a publicly available reference dataset “Human Body Index – Transcriptional Profiling”.
  2. bThe gene lists were obtained from [16].
  3. cp-value.