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Table 2 The mean squared errors (MSE) of 10 fold cross validation from Elastic-net of genomics data against clinical stages of CRC

From: Systematic genomic identification of colorectal cancer genes delineating advanced from early clinical stage and metastasis

Genomics

MSE

Integrative genomics

0.78224

Copy Number alone

0.96308

Mutation alone

0.97295

Methylation alone

0.91856

Gene expression alone

0.79906

  1. Integrative analysis - the combined genomic data – showed the least MSE compared to separate genomics analysis. Therefore, the improvement was observed in integration of genomics data.
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BMC Medical Genomics

ISSN: 1755-8794

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