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Table 7 Performances of the classifier model and the influence of newly added features on the data of 11 different tissues and cell types: without histone modification.

From: CpGIMethPred: computational model for predicting methylation status of CpG islands in human genome

Procedure

Tissue/Cell Type

with added features

without added features

  

SP

SE

ACC

CC

SP

SE

ACC

CC

Validation

CD4

0.9670

0.2247

0.8001

0.3302

0.8972

0.2338

0.7352

0.3013

Testing

CD8

0.9722

0.2108

0.8104

0.3325

0.8978

0.2284

0.7350

0.3009

 

liver

0.9678

0.2143

0.8122

0.3328

0.8965

0.2325

0.7298

0.3005

 

heart muscle

0.9562

0.2386

0.8186

0.3402

0.8804

0.2468

0.7190

0.3001

 

skeletal muscle

0.9594

0.2364

0.8306

0.3268

0.8874

0.2476

0.7268

0.3003

 

embryonic skeletal

0.9425

0.2298

0.8100

0.3228

0.8805

0.2406

0.7222

0.3002

 

embryonic liver

0.9389

0.2306

0.8054

0.3217

0.8796

0.2512

0.7350

0.3015

 

placenta

0.9655

0.2184

0.8276

0.3450

0.9004

0.2216

0.7398

0.3128

 

dermal melanocytes

0.9700

0.2186

0.8156

0.3358

0.8986

0.2306

0.7354

0.3027

 

dermal broblasts

0.9605

0.2200

0.8058

0.3286

0.8902

0.2276

0.7308

0.3016

 

dermal keratinocytes

0.9425

0.2204

0.8095

0.3325

0.8854

0.2304

0.7304

0.3013

 

sperm

0.8524

0.2365

0.7625

0.2678

0.7906

0.2408

0.6705

0.2317