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Table 4 Cd2+ repressed genes in chronic cadmium-exposed human proximal tubule cells (13 days, p value < 0.001)

From: Short and long term gene expression variation and networking in human proximal tubule cells when exposed to cadmium

Probe

Symbol

Gene name

Pr(> |t|)

218025_s_at

PECI

peroxisomal D3,D2-enoyl-CoA isomerase

3.66E-05

202781_s_at

INPP5K

inositol polyphosphate-5-phosphatase K

6.81E-05

216053_x_at

FAM182A

family with sequence similarity 182, member A

0.0001

228665_at

CYYR1

cysteine/tyrosine-rich 1

0.000109

228374_at

C10orf28

chromosome 10 open reading frame 28

0.000119

224913_s_at

TIMM50

translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)

0.000131

215438_x_at

GSPT1

G1 to S phase transition 1

0.000132

218404_at

SNX10

sorting nexin 10

0.000133

226016_at

CD47

CD47 molecule

0.000135

203574_at

NFIL3

nuclear factor, interleukin 3 regulated

0.000136

227190_at

TMEM37

transmembrane protein 37

0.00017

201225_s_at

SRRM1

serine/arginine repetitive matrix 1

0.000211

1552846_s_at

RAB42

RAB42, member RAS oncogene family

0.000217

228520_s_at

APLP2

amyloid beta (A4) precursor-like protein 2

0.000219

227769_at

NA

NA

0.000231

201855_s_at

ATMIN

ATM interactor

0.000256

219379_x_at

ZNF358

zinc finger protein 358

0.000275

32811_at

MYO1C

myosin IC

0.000282

200707_at

PRKCSH

protein kinase C substrate 80K-H

0.000296

229007_at

LOC283788

FSHD region gene 1 pseudogene

0.000301

219271_at

GALNT14

UDP-N-acetyl-alpha-D-galactosamine:polypeptide Nacetylgalactosaminyltransferase 14 (GalNAc-T14)

0.000304

201816_s_at

GBAS

glioblastoma amplified sequence

0.000305

217817_at

ARPC4

actin related protein 2/3 complex, subunit 4, 20 kDa

0.000315

201185_at

HTRA1

HtrA serine peptidase 1

0.000316

205739_x_at

ZNF107

zinc finger protein 107

0.000323

212418_at

ELF1

E74-like factor 1 (ets domain transcription factor)

0.000327

209431_s_at

PATZ1

POZ (BTB) and AT hook containing zinc finger 1

0.000367

201549_x_at

KDM5B

lysine (K)-specific demethylase 5B

0.000373

203858_s_at

COX10

COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)

0.000425

218483_s_at

C11orf60

chromosome 11 open reading frame 60

0.00044

218045_x_at

PTMS

parathymosin

0.000454

212493_s_at

SETD2

SET domain containing 2

0.000459

204805_s_at

H1FX

H1 histone family, member X

0.000471

226926_at

DMKN

dermokine

0.000474

211025_x_at

COX5B

cytochrome c oxidase subunit Vb

0.000494

212904_at

LRRC47

leucine rich repeat containing 47

0.000544

215543_s_at

LARGE

like-glycosyltransferase

0.000546

228998_at

TNRC6B

trinucleotide repeat containing 6B

0.000575

210220_at

FZD2

frizzled homolog 2 (Drosophila)

0.000632

225247_at

C19orf6

chromosome 19 open reading frame 6

0.00065

212264_s_at

WAPAL

wings apart-like homolog (Drosophila)

0.00066

244287_at

SFRS12

splicing factor, arginine/serine-rich 12

0.000661

221829_s_at

TNPO1

transportin 1

0.000704

1553313_s_at

SLC5A3

solute carrier family 5 (sodium/myo-inositol cotransporter), member 3

0.000786

232412_at

FBXL20

F-box and leucine-rich repeat protein 20

0.000788

217964_at

TTC19

tetratricopeptide repeat domain 19

0.000788

223056_s_at

XPO5

exportin 5

0.000792

213470_s_at

HNRNPH1

heterogeneous nuclear ribonucleoprotein H1 (H)

0.000816

214543_x_at

QKI

quaking homolog, KH domain RNA binding (mouse)

0.00085

243829_at

BRAF

v-raf murine sarcoma viral oncogene homolog B1

0.000864

34260_at

TELO2

TEL2, telomere maintenance 2, homolog (S. cerevisiae)

0.000874

203392_s_at

CTBP1

C-terminal binding protein 1

0.000877

201928_at

PKP4

plakophilin 4

0.000888

232814_x_at

KLC1

kinesin light chain 1

0.000907

212114_at

LOC552889

hypothetical protein LOC552889

0.000922

225399_at

TSEN15

tRNA splicing endonuclease 15 homolog (S. cerevisiae)

0.000924

236035_at

NA

NA

0.000931

229400_at

HOXD10

homeobox D10

0.000961

208847_s_at

ADH5

alcohol dehydrogenase 5 (class III), chi polypeptide

0.000984

214800_x_at

BTF3

basic transcription factor 3

0.000992

204619_s_at

VCAN

versican

0.000997

218826_at

SLC35F2

solute carrier family 35, member F2

0.000998