Assessment of gene order computing methods for Alzheimer's disease

BMC Medical Genomics

Table 2 The statistical comparison of the quality of gene order

Algorithm	Distance	Control man	Incipient patient	Moderate patient	Severe patient
ACO	ED	507.9163	442.7255	459.7381	504.0716
GA	ED	1800.9287	1582.5394	1689.2580	1604.3304
IGA	ED	566.0912	508.6311	516.0917	579.3226
ACO	SED	484.8221	419.8804	437.9346	479.5701
GA	SED	1916.9891	1679.9281	1789.6030	1682.0008
IGA	SED	576.9810	521.2992	529.8852	593.4252
ACO	PD	2737.5938	2233.1848	2518.7568	2167.4011
GA	PD	2882.9409	2532.2205	2708.5082	2515.8520
IGA	PD	2712.5501	2319.1112	2513.9173	2218.1910

Notation: ED: Euclidean Distance; PD: Pearson Distance; SED: Squared Euclidean Distance
Ancillary information: all data in this table is the value of the fitness function, and it is the average of 40 times of tests. In addition, the distance formula used to calculate fitness value is ED. Every data in Table 5 corresponds to an average runtime.

ISSN: 1755-8794