Id
|
Untreated
|
Treated
|
|
ShrinkHT NP; BFDR
|
ShrinkHT G; BFDR
|
limma FDR
|
608 | -0.63 | 0.22 | -0.14 | -1.20 | -1.29 | -1.37 | 0.337 | 0.0136 | 0.080 | 0.727 |
749 | 0.22 | 0.28 | 0.43 | -0.51 | -0.42 | -0.25 | 0.255 | 0.0362 | 0.115 | 0.413 |
176 | 0.38 | 0.39 | 0.59 | -0.06 | -0.31 | 0.11 | 0.175 | 0.0738 | 0.169 | 0.727 |
- 1st column: siRNA id; 2nd to 7th column: log2 cell viability data for untreated and treated cell lines, corrected for the differential effect in positive control; 8th column: estimate of treatment sensitization effect ('untreated - treated') in excess of the positive control when ShrinkHT is used with a non-parametric prior; 9th and 10th column: BFDRs when using a non-parametric and Gaussian prior; 11th column: Benjamini-Hochberg corrected FDR for limma results
