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Table 2 Enriched gene ontology categories in genes with multiple TSRs

From: The global landscape of intron retentions in lung adenocarcinoma

Categorya Term Correctedb Classc
hsa05322 Systemic lupus erythematosus 4.99E-08 KEGG
GO:0005583 Fibrillar collagen 0.00163 GO:CC
hsa03010 Ribosome 1.74E-03 KEGG
GO:0005201 Extracellular matrix structural constitu… 0.006651 GO:MF
GO:0007411 Axon guidance 0.009976 GO:BP
GO:0043062 Extracellular structure organization 0.009976 GO:BP
GO:0030199 Collagen fibril organization 0.009976 GO:BP
hsa00970 Aminoacyl-tRNA biosynthesis 1.03E-02 KEGG
hsa04370 VEGF signaling pathway 1.03E-02 KEGG
GO:0048407 Platelet-derived growth factor binding 0.011402 GO:MF
GO:0044420 Extracellular matrix part 0.015466 GO:CC
GO:0005581 Collagen 0.015466 GO:CC
GO:0030198 Extracellular matrix organization 0.020783 GO:BP
GO:0006935 Chemotaxis 0.022168 GO:BP
GO:0042330 Taxis 0.022168 GO:BP
GO:0031256 Leading edge membrane 0.028215 GO:CC
hsa04510 Focal adhesion 3.64E-02 KEGG
GO:0005578 Proteinaceous extracellular matrix 0.047652 GO:CC
  1. aCategories with more than 1000 genes were removed.
  2. bFisher’s exact test after Benjamini-Hochberg correction.
  3. cGO: gene ontology; KEGG: Kyoto Encyclopedia of Genes and Genomes; BP: biological process; MF: molecular function; CC: cellular component.