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Table 6 Summary of WGS coverage statistics

From: Analytical validation of whole exome and whole genome sequencing for clinical applications

Replicate Mean % Bases > =1X % Bases > =10X % Bases > =20X % Bases > =30X % Coding bases callable
NA12878
r1-1-1 51.0 95.4 94.9 94.3 93.1 91.8
r1-1-3 49.8 95.4 94.9 94.3 93.1 91.9
r2-1-1 36.5 95.4 94.7 93.5 86.9 91.6
r2-2-1 34.6 95.4 94.7 93.2 82.9 91.2
r3-1-1 49.9 95.5 95.0 94.5 93.5 91.9
r3-2-1 39.8 95.5 94.8 93.9 89.4 91.0
NA12891
r3-1-2 42.7 96.8 96.1 94.3 88.7 91.2
NA12892
r3-1-4 45.1 95.2 90.8 86.6 81.3 90.9
NA18507
r2-1-3 30.0 96.8 95.7 89.4 65.8 87.3
r2-1-4 35.8 96.8 96.0 92.3 83.4 90.2
r3-1-3 51.7 96.9 96.3 95.4 91.6 91.6
NA10080
r2-1-2 35.1 96.9 96.1 92.0 81.7 89
  1. Percent RefSeq Coding Bases Callable reports the percentage of all RefSeq coding exons bases (as downloaded from the UCSC Genome Browser) considered callable.