Table 2 Whole genome sequencing
Participant code | Total reads sequenced | Total bases sequenced | Coverage | Number of germline variants | Percent dbSNP | Transition/transversion ratio |
|---|---|---|---|---|---|---|
CLN2 Normal | 1.9 billion | 200 Gb | 50X | 2.3 million | 88% | 2.05 |
CLN2 Tumor | 1.4 billion | 146 Gb | 42X | — |  |  |
CLN3 Normal | 2.0 billion | 210 Gb | 62X | 3.4 million | 88% | 2.06 |
CLN3 Tumor | 1.96 billion | 204 Gb | 40X | — |  |  |
CLN4 Normal | 0.97 billion | 100 Gb | 28X | 3.3 million | 88% | 2.06 |
CLN4 Tumor | 1.03 billion | 107 Gb | 31X | — |  |  |