Table 1 Characterization of modules
Module number | Module | Number of probes | Number of unique genes | Enrichment term | Fold enrichment | FDR |
|---|---|---|---|---|---|---|
1 | Black | 726 | 711 | IPR001909:Krueppel-associated box | 3.97 | 1.39×10-07 |
2 | Blue | 862 | 847 | IPR017973:Cytochrome P450, C-terminal region | 4.9 | 3.93×10-04 |
3 | Brown | 666 | 655 | GO:0001817 ~ regulation of cytokine production | 4.41 | 1.64×10-08 |
4 | Green- yellow | 96 | 94 | SP_PIR_KEYWORDS: protein transport | 5.45 | 4.15×10-04 |
5 | Magenta | 134 | 132 | SP_PIR_KEYWORDS: protein transport | 5.45 | 4.15×10-04 |
6 | Pink | 173 | 167 | SP_PIR_KEYWORDS: methyltransferase | 6.32 | 0.044 |
7 | Purple | 115 | 111 | GO:0030529 ~ ribonucleoprotein complex | 5.29 | 0.012 |
8 | Red | 315 | 315 | none | Â | Â |
9 | Salmon | 524 | 517 | GO:0005578 ~ proteinaceous extracellular matrix | 3.1 | 2.32×10-06 |
10 | Turquoise | 946 | 936 | GO:0007186 ~ G-protein coupled receptor protein signaling pathway | 2.3 | 8.39×10-10 |
No module | Grey | 3616 | 3538 | Â | Â | Â |