From: IGENT: efficient entropy based algorithm for genome-wide gene-gene interaction analysis
SNP size | IGENT_exhaust | BOOST | MDR | RF | SVM |
---|---|---|---|---|---|
50 | <1s | <1s | 1s | 11s | 13s |
100 | <1s | <1s | 4s | 46s | 53s |
500 | <1s | <1s | 1m 8s | 20m | 23m |
1K | 3s | 1s | 4m 25s | 1h 15m | 1h 29m |
2K | 8s | 6s | 19m 52s | 5h | 5h 50m |
5K | 38s | 30s | 2h 4m | 1d 6h | 1d 12h |
10K | 2m 34s | 2m 7s | *8h 16m | *5d 5h | *6d 3h |
100K | 4h 23m | 3h 32m | *35d | *520d | *614d |
350K | 2d 4h | 1d 19h | *422d | *6366d | *7524d |
500K | 4d 10h | 3d 15h | *861d | *12992d | *15353d |