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Table 1 Default miRanda scoring function.

From: GAMUT: GPU accelerated microRNA analysis to uncover target genes through CUDA-miRanda

 

A

C

G

T/U

A

-3

   

C

-3

-3

  

G

-3

5

-3

 

T/U

5

-3

1

-3

  1. In the microRNA seed region, all vaules are multiplied by a scaling factor (the default is 4).