Skip to main content

Table 5 The MMR performances of ClusterONE on PPI datasets using the MIPS gold standard

From: Integrating PPI datasets with the PPI data from biomedical literature for protein complex detection

Threshold Collins Gavin Krogan-core Krogan-extended BioGRID Avg.Δ
Origin 0.3465 0.3125 0.3049 0.3103 0.2876  
0 0.3456 0.3069 0.3154 0.3277 0.2907  
-0.1 0.3482 0.3069 0.3143 0.3275 0.2901  
-0.2 0.3488 0.3142 0.316 0.3298 0.2726  
-0.3 0.3504 0.3102 0.3181 0.3302 0.2781  
-0.4 0.3502 0.3118 0.3232 0.3334 0.2902  
-0.5 0.3504 0.3163 0.3234 0.3348 0.3007  
-0.6 0.3495 0.3216 0.3236 0.3338 0.2945  
-0.7 0.3564 0.323 0.3172 0.3258 0.2978  
-0.8 0.3549 0.3226 0.3236 0.3195 0.3005  
-0.9 0.3534 0.3213 0.3149 0.3231 0.2913  
Δ(-0.6) 0.87% 2.91% 6.13% 7.57% 2.40% 3.976%